International Journal on Advanced Science, Engineering and Information Technology, Vol. 9 (2019) No. 3, pages: 999-1007, DOI:10.18517/ijaseit.9.3.8041

A New Feature Extraction Algorithm to Extract Differentiate Information and Improve KNN-based Model Accuracy on Aquaculture Dataset

Oskar Natan, Agus Indra Gunawan, Bima Sena Bayu Dewantara


In the world of aquaculture, understanding the condition of a pond is very important for a farmer in deciding which action should they take to prevent any bad condition occurred. Condition of a pond can be justified by measuring plenty of water parameters which can be divided into 3 categories that are physical, chemical and biological. The physical parameter is any physical quantity that can be measured in the pond. The chemical parameter is any kind of chemical substances that are dissolved in water. The biological parameter is any organic matter that lives in water. However, all of these parameters are not so distinguishable in representing the condition of a pond. Therefore, the farmer experience difficulties in justifying the condition and taking proper action to their pond. Even with the help of the K-Nearest Neighbors (KNN) algorithm combined with grid search optimization to model the data, the result is still not satisfying where the model only achieve accuracy of 0.701 in leave one out validation. To overcome this problem, a kind of feature extraction algorithm is needed to extract more information and make the data become more differentiate in representing the condition of the pond. With the help of our proposed feature extraction algorithm, optimized KNN can model the data easier and achieve higher accuracy. From the experiment results, the proposed feature extraction algorithm gives an impressive performance where it increases the accuracy to 0.741. A comparison with other feature extraction algorithms such as Principal Component Analysis (PCA), Non-negative Matrix Factorization (NMF), and Singular Value Decomposition (SVD) is also conducted to validate how good the proposed feature extraction algorithm is. As a result, the proposed algorithm is surpassing the other algorithms which only achieve the accuracy of 0.707, 0.718, and 0.718, respectively.


feature extraction; algorithm; KNN; grid search; aquaculture

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